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Make sure you don't have the turn signal on, or the system may operate like European "curb lights" and leave one side on. If the turn signal is not on, try disconnecting the battery terminals, and then touching the CABLE ENDS together to discharge any stored memory in all the modules to reset them. This should take care of the comfort module, if this does not do it, and it only happens when you lock the car up with the remote, then the comfort module is your issue.