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Hi from Just Answer. I'm PDtax, and will assist.
You need 941 efiling software to file electronically. Most businesses use their tax pro to e-file. If you are preparing and filing yourself, print out the form and mail it in, postmarked to beat the 11/2/15 filing deadline.
The EFTPS system will accept your payment, or you can include a check with a voucher 941-V.
Thanks for asking at Just Answer. Positive feedback is appreciated. I'm PDtax.