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Can you maybe re-state the question (express it a little differently)?
It should ONLY be taxed once ... Now, they may have WITHHELD taxes (like W-2 withholding), which reduces the tax you actually owe at tax time (think of the withholding as a pre-payment of taxes) ... Offsets whatever you actually owe whehn you do your taxes in April for the previous year.
Is this what you're asking about?
For example ... Lets say I take a plop of 10,000 and tell thme to withhold 10% for taxes
So I only receive 9000
Then when I go to do my taxes, the next april, that income DOES get added in and increase my tax BUT the withholding I had done completely OFFSETS that tax.
Have I understood your question?
let me know and we can go from here