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Intestinal gas problem can cause such random pain at different areas commonly. Diverticular disease and dysfunctional gallbladder can cause such problem. Food may not digest well resulting in excessive bacterial action in the intestine producing gas and intestinal colic. Excess bacterial overgrowth in the small intestine known as SIBO syndrome.This is not usually diagnosed by the colonoscopy.Small intestinal aspirate can be sent for bacterial count.Carbohydrate breath test ( D xylose) is a simple test to diagnose this condition. But, the treatment is much easier.A 14 day course of Rifaximine improves the symptoms dramatically.
You should consider following low fermentable sugar diet ( FODMAP diet) to reduce your symptoms. Please go to this link for detailed information:http://stanfordhealthcare.org/content/dam/SHC/for-patients-component/programs-services/clinical-nutrition-services/docs/pdf-lowfodmapdiet.pdf
Please also include prebiotics like Inulin daily to keep your colon acidic which prevent gas producing bacteria. Also take a probiotic ( lactobacilli, bifidobacterium) daily to restore intestinal microbial balance. Culturelle 30 Counts twice daily should be fine. Please consider taking Simethicone ( GasX) strips before each meal and activated charcoal tablets to reduce gas formation.
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Chronic pancreatitis can interfere with the food digestion. That is also possible. Stool fat estimation, CT scan with contrast should be considered as part of evaluation. Digestive enzyme supplementation with meals will help in that case. Best wishes