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No one can answer this for 100% sure, for a number of reasons.
First, the government doesn't release their info on how they check passenger manifests and when they check them.
Next, they don't release the information on how they are conducting security checks ahead of time.
However, I have known quite a few people that fly in their own state with warrants and none of them have been arrested yet.
Usually people get caught when they enter or leave the country, not flying domestically.