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Hey! Welcome to Just Answer. Dead battary is always a headache. So u got it charged. Started and have warning lights on. Have you drove it yet? A few systems first require a short drive so everything can sync up. My Audi always had a traction control light. Try a quick trip to the store and back. Most system will complete run with a short trip and a cold start, unless theres a proboem itbwill take longer. Once your back let me know how it drove. And we will go from there.